Subspace communication in the hippocampal–retrosplenial axis - Nature

Data availability

All datasets used are available online (https://dandiarchive.org/dandiset/001695/0.260319.2023) in the Neurodata Without Borders (NWB) format. A Jupyter notebook is provided to show how to handle the data. The Allen Institute Visual Coding Dataset can be accessed online (https://allensdk.readthedocs.io/en/latest/visual_coding_neuropixels.html). Source data are provided with this paper.

Code availability

All original code developed for this project is available online (https://pypi.org/project/partial-CCA/0.1.0/ and https://github.com/joaqgonzar/pCCA-Hippocampus). Two Jupyter notebooks are provided demonstrating pCCA use with simulated and real data.

ReferencesSemedo, J. D., Zandvakili, A., Machens, C. K., Yu, B. M. & Kohn, A. Cortical areas interact through a communication subspace. Neuron 102, 249–259 (2019).Article